Description
heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
Location
Chromosome 1: 244,840,638-244,854,748 reverse strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTHUMG00000040396 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HNRNPU-002 | OTTHUMT00000097163.4 | 6858 | 825aa | OTTHUMP00000038193 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41479 | Q00839 | |
| HNRNPU-001 | OTTHUMT00000097162.4 | 6827 | 806aa | OTTHUMP00000038192 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31081 | - | |
| HNRNPU-004 | OTTHUMT00000097165.3 | 4546 | 549aa | OTTHUMP00000283750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HNRNPU-028 | OTTHUMT00000492373.1 | 4227 | 546aa | OTTHUMP00000283812 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HNRNPU-003 | OTTHUMT00000097164.4 | 3207 | 602aa | OTTHUMP00000038194 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5RI18 | |
| HNRNPU-025 | OTTHUMT00000492371.1 | 3120 | 744aa | OTTHUMP00000283811 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HNRNPU-031 | OTTHUMT00000492377.1 | 2698 | 728aa | OTTHUMP00000283814 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-022 | OTTHUMT00000492369.1 | 2640 | 547aa | OTTHUMP00000283809 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HNRNPU-019 | OTTHUMT00000492351.1 | 1450 | 327aa | OTTHUMP00000283795 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-007 | OTTHUMT00000097404.3 | 1069 | 302aa | OTTHUMP00000283751 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-009 | OTTHUMT00000356456.2 | 3498 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HNRNPU-015 | OTTHUMT00000492352.1 | 2846 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HNRNPU-011 | OTTHUMT00000476204.2 | 5290 | 152aa | OTTHUMP00000275412 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WZF3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-029 | OTTHUMT00000492370.1 | 4239 | 70aa | OTTHUMP00000283810 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HNRNPU-023 | OTTHUMT00000492374.1 | 3650 | 372aa | OTTHUMP00000283813 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HNRNPU-010 | OTTHUMT00000492349.3 | 2917 | 804aa | OTTHUMP00000283794 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HNRNPU-030 | OTTHUMT00000492378.1 | 2045 | 128aa | OTTHUMP00000283815 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-032 | OTTHUMT00000492379.1 | 1922 | 527aa | OTTHUMP00000283816 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-014 | OTTHUMT00000492348.1 | 871 | 181aa | OTTHUMP00000283793 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-018 | OTTHUMT00000492353.1 | 461 | 48aa | OTTHUMP00000283796 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-012 | OTTHUMT00000476205.2 | 451 | 17aa | OTTHUMP00000275413 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HNRNPU-016 | OTTHUMT00000492355.1 | 883 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HNRNPU-020 | OTTHUMT00000492368.1 | 328 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HNRNPU-013 | OTTHUMT00000097166.3 | 12852 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-026 | OTTHUMT00000492372.2 | 5678 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-005 | OTTHUMT00000097402.2 | 5273 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-008 | OTTHUMT00000356455.3 | 4844 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-024 | OTTHUMT00000492367.1 | 4323 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-017 | OTTHUMT00000492354.2 | 3940 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-021 | OTTHUMT00000492376.2 | 2851 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-006 | OTTHUMT00000097403.2 | 2625 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HNRNPU-027 | OTTHUMT00000492375.1 | 2225 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
