Transcript: ARHGEF16-003 OTTHUMT00000001517.1

Description

Rho guanine exchange factor (GEF) 16

Location

About this transcript

This transcript has 12 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARHGEF16-001	OTTHUMT00000001515.1	3061	709aa	OTTHUMP00000000683	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46	Q5VV41
ARHGEF16-003	OTTHUMT00000001517.1	2219	421aa	OTTHUMP00000000685	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ARHGEF16-002	OTTHUMT00000001516.2	2211	421aa	OTTHUMP00000000684	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ARHGEF16-005	OTTHUMT00000001519.3	836	146aa	OTTHUMP00000200633	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B0QZD3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ARHGEF16-007	OTTHUMT00000324124.2	576	180aa	OTTHUMP00000200632	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B0QZD4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ARHGEF16-004	OTTHUMT00000001518.2	2340	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARHGEF16-006	OTTHUMT00000324123.1	1403	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,219 bps Translation length: 421 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 08/10/2003)

Alternative symbols

RP11-168F9.1-003

Other assemblies

This transcript maps to 3,466,971-3,481,113 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000378371

Curation Method

Manual annotation from Havana