Transcript: SFPQ-001 OTTHUMT00000011984.4

Description

splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated)

Location

Chromosome 1: 35,182,932-35,193,148 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 23 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000004157 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SFPQ-001	OTTHUMT00000011984.4	3747	707aa	OTTHUMP00000004329	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS388	P23246
SFPQ-002	OTTHUMT00000012072.3	874	223aa	OTTHUMP00000224028	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SFPQ-003	OTTHUMT00000012073.4	464	88aa	OTTHUMP00000219404	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SFPQ-004	OTTHUMT00000011997.2	2835	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SFPQ-005	OTTHUMT00000011998.2	1431	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SFPQ-007	OTTHUMT00000012075.1	693	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SFPQ-008	OTTHUMT00000012076.1	662	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SFPQ-009	OTTHUMT00000012077.1	440	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SFPQ-010	OTTHUMT00000012071.1	434	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SFPQ-006	OTTHUMT00000012074.1	339	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 10 Transcript length: 3,747 bps Translation length: 707 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS388

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 27/02/2014 (Created on 27/11/2003)

Alternative symbols

RP11-181E22.2-001

Other assemblies

This transcript maps to 35,182,932-35,193,148 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000357214

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SFPQ-001 OTTHUMT00000011984.4

Summary

Transcript-based displays