Transcript: ASH1L-004 OTTHUMT00000039403.2

Description

ash1 (absent, small, or homeotic)-like (Drosophila)

Location

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ASH1L-002	OTTHUMT00000039401.2	10979	2964aa	OTTHUMP00000015898	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1113	-
ASH1L-001	OTTHUMT00000039400.1	11942	2969aa	OTTHUMP00000015897	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9NR48
ASH1L-006	OTTHUMT00000406243.1	1862	177aa	OTTHUMP00000242293	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ASH1L-004	OTTHUMT00000039403.2	784	154aa	OTTHUMP00000242292	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YI82	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ASH1L-003	OTTHUMT00000039402.1	723	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ASH1L-005	OTTHUMT00000039404.1	596	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ASH1L-007	OTTHUMT00000406242.1	584	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 784 bps Translation length: 154 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 27/02/2004)

Alternative symbols

RP11-21N7.5-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 155,343,656-155,349,351 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000492987

Curation Method

Manual annotation from Havana