Transcript: SMOC2-004 OTTHUMT00000043204.4

Description

SPARC related modular calcium binding 2

Location

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMOC2-002	OTTHUMT00000043202.1	3150	457aa	OTTHUMP00000017666	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5307	-
SMOC2-001	OTTHUMT00000043201.1	3117	446aa	OTTHUMP00000017665	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55076	Q9H3U7
SMOC2-005	OTTHUMT00000043205.1	672	84aa	OTTHUMP00000017669	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y5I1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMOC2-004	OTTHUMT00000043204.4	400	67aa	OTTHUMP00000207033	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0Y3J4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMOC2-003	OTTHUMT00000043203.3	362	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 400 bps Translation length: 67 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 28/02/2014 (Created on 06/10/2003)

Alternative symbols

RP11-270C4__A.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 168,653,045-168,666,503 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000392100

Curation Method

Manual annotation from Havana