Transcript: SACS-001 OTTHUMT00000044148.3

Description

spastic ataxia of Charlevoix-Saguenay (sacsin)

Location

About this transcript

This transcript has 9 exons and is annotated with 31 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SACS-001	OTTHUMT00000044148.3	15324	4579aa	OTTHUMP00000018109	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9300	Q9NZJ4
SACS-003	OTTHUMT00000044150.3	15134	3829aa	OTTHUMP00000018111	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9NZJ4
SACS-004	OTTHUMT00000326608.1	2784	732aa	OTTHUMP00000201880	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SACS-005	OTTHUMT00000326609.1	1709	374aa	OTTHUMP00000201881	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SACS-002	OTTHUMT00000044149.2	513	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 9 Transcript length: 15,324 bps Translation length: 4,579 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9300

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 17/11/2003)

Alternative symbols

RP11-40O20.2-001

Annotation Attributes

inferred exon combination [Definitions]

Remarks

NM_014363.4

Other assemblies

This transcript maps to 23,328,826-23,411,513 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000382292

Curation Method

Manual annotation from Havana