Description
nucleoporin 58kDa
Location
Chromosome 13: 25,301,631-25,336,340 forward strand.
About this transcript
This transcript has 13 exons and is annotated with 12 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000016608 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NUP58-001 | OTTHUMT00000044228.3 | 4332 | 599aa | OTTHUMP00000018146 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9314 | Q9BVL2 | |
| NUP58-007 | OTTHUMT00000354750.1 | 2489 | 587aa | OTTHUMP00000214938 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31949 | - | |
| NUP58-005 | OTTHUMT00000044232.2 | 6360 | 485aa | OTTHUMP00000018149 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| NUP58-009 | OTTHUMT00000354752.2 | 1659 | 510aa | OTTHUMP00000214939 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BYF2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NUP58-004 | OTTHUMT00000044231.1 | 1408 | 463aa | OTTHUMP00000018148 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5JRG1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NUP58-008 | OTTHUMT00000354751.1 | 1611 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NUP58-010 | OTTHUMT00000354753.2 | 605 | 62aa | OTTHUMP00000214940 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NUP58-011 | OTTHUMT00000354754.1 | 563 | 36aa | OTTHUMP00000214941 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NUP58-014 | OTTHUMT00000354757.1 | 551 | 128aa | OTTHUMP00000214942 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WC35 | |
| NUP58-002 | OTTHUMT00000044229.2 | 1854 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NUP58-006 | OTTHUMT00000044233.2 | 947 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NUP58-003 | OTTHUMT00000044230.1 | 560 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NUP58-012 | OTTHUMT00000354755.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NUP58-013 | OTTHUMT00000354756.1 | 582 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NUP58-015 | OTTHUMT00000354758.1 | 564 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
