Transcript: SFTPA1-009 OTTHUMT00000048957.1

Description

surfactant protein A1

Location

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
SFTPA1-008	OTTHUMT00000048958.3	2210	263aa	OTTHUMP00000019930	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44444
SFTPA1-009	OTTHUMT00000048957.1	596	158aa	OTTHUMP00000019929	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SFTPA1-007	OTTHUMT00000048960.3	527	158aa	OTTHUMP00000019931	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SFTPA1-012	OTTHUMT00000367915.1	1261	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
SFTPA1-010	OTTHUMT00000048956.2	934	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
SFTPA1-011	OTTHUMT00000048959.1	342	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 6 Transcript length: 596 bps Translation length: 158 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 09/07/2015 (Created on 08/12/2003)

Alternative symbols

RP11-589B3.2-009

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 79,610,955-79,613,840 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000439264

Curation Method

Manual annotation from Havana