Transcript: ERCC6L2-001 OTTHUMT00000053247.2

Description

excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2

Location

Chromosome 9: 95,875,701-95,968,840 forward strand.

About this transcript

This transcript has 14 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000020289 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ERCC6L2-001	OTTHUMT00000053247.2	4564	712aa	OTTHUMP00000021714	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35072	Q5T890
ERCC6L2-006	OTTHUMT00000053252.4	2936	522aa	OTTHUMP00000021717	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BXQ9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERCC6L2-007	OTTHUMT00000317478.2	546	182aa	OTTHUMP00000197016	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ERCC6L2-004	OTTHUMT00000053250.1	498	82aa	OTTHUMP00000021716	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERCC6L2-005	OTTHUMT00000053251.3	2849	54aa	OTTHUMP00000273167	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERCC6L2-002	OTTHUMT00000053248.3	1822	365aa	OTTHUMP00000197017	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F2Z2R4
ERCC6L2-003	OTTHUMT00000053249.1	3586	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ERCC6L2-008	OTTHUMT00000317479.1	468	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 14 Transcript length: 4,564 bps Translation length: 712 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS35072

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 09/04/2003)

Alternative symbols

RP11-346B7.2-001

Remarks

novel protein containing SNF2 family N-terminal and Helicase conserved C-terminal domains

Other assemblies

This transcript maps to 95,875,701-95,968,840 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000288985

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ERCC6L2-001 OTTHUMT00000053247.2

Summary

Transcript-based displays