Transcript: GOLGA1-003 OTTHUMT00000054051.2

Description

golgi autoantigen, golgin subfamily a, 1

Location

Chromosome 9: 124,878,378-124,929,268 reverse strand.

About this transcript

This transcript has 18 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000020665 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GOLGA1-001	OTTHUMT00000054049.2	4811	767aa	OTTHUMP00000022117	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6860	Q92805
GOLGA1-005	OTTHUMT00000054053.2	589	112aa	OTTHUMP00000022120	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GOLGA1-003	OTTHUMT00000054051.2	4107	168aa	OTTHUMP00000272366	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GOLGA1-002	OTTHUMT00000054050.3	935	151aa	OTTHUMP00000022118	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GOLGA1-009	OTTHUMT00000470002.1	886	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
GOLGA1-004	OTTHUMT00000054052.1	522	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 4,107 bps Translation length: 168 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/12/2003)

Alternative symbols

RP11-175D17.2-003

Annotation Attributes

dotter confirmed [Definitions]

not organism-supported

Remarks

golgi autoantigen, golgin subfamily a, 1

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 124,878,378-124,929,268 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000475407

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: GOLGA1-003 OTTHUMT00000054051.2

Summary

Transcript-based displays