Transcript: CDK9-005 OTTHUMT00000054239.2

Description

cyclin-dependent kinase 9

Location

Chromosome 9: 127,785,679-127,787,575 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000020715 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CDK9-001	OTTHUMT00000054235.1	2463	372aa	OTTHUMP00000022198	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6879	A0A024R880
CDK9-005	OTTHUMT00000054239.2	702	194aa	OTTHUMP00000022199	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	X6RE90	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CDK9-006	OTTHUMT00000054240.2	519	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CDK9-002	OTTHUMT00000054236.1	706	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CDK9-003	OTTHUMT00000054237.1	510	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CDK9-004	OTTHUMT00000054238.1	458	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 3 Transcript length: 702 bps Translation length: 194 residues

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 11/12/2003)

Alternative symbols

RP11-228B15.5-005

Remarks

cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)(TAK, C-2k, CDC2L4, PITALRE)

Extends 5' end of gene to start at Met upstream of published Met; annotated as variant as evidence overwhelmingly supports downstream transcriptional start

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 127,785,679-127,787,575 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000421939

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CDK9-005 OTTHUMT00000054239.2

Summary

Transcript-based displays