Description
mutS homolog 5 (E. coli)
Location
Chromosome 6: 31,739,948-31,762,834 forward strand.
About this transcript
This transcript has 25 exons and is annotated with 17 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000167551 Show transcript tableHide transcript table
Show/hide columns (1 hidden)
- Name
- Transcript ID
- bp
- Protein
- Translation ID
- Biotype
- CCDS
- UniProt
- Flags
| Name | Transcript ID | bp | Protein | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|
| MSH5-001 | OTTHUMT00000076243.4 | 3094 | 834aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4720 | O43196 | |
| MSH5-002 | OTTHUMT00000076244.3 | 2775 | 834aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4720 | O43196 | |
| MSH5-004 | OTTHUMT00000268160.1 | 2708 | 835aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34410 | A0A024RCV6 | |
| MSH5-005 | OTTHUMT00000268161.3 | 2669 | 822aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34409 | A0A0G2JK88 | |
| MSH5-006 | OTTHUMT00000268162.1 | 2704 | 508aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2ABF0 | |
| MSH5-011 | OTTHUMT00000268165.3 | 1000 | 333aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2ABE9 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| MSH5-008 | OTTHUMT00000076248.2 | 694 | 194aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MSH5-018 | OTTHUMT00000268170.3 | 616 | 156aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2ABF1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MSH5-020 | OTTHUMT00000355293.1 | 6475 | No protein | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MSH5-021 | OTTHUMT00000355294.1 | 2706 | 637aa | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C2J4 | |
| MSH5-010 | OTTHUMT00000268164.2 | 2296 | 159aa | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MSH5-017 | OTTHUMT00000076250.4 | 857 | 166aa | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YDS7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MSH5-012 | OTTHUMT00000268166.3 | 764 | 43aa | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MSH5-019 | OTTHUMT00000355292.1 | 944 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MSH5-013 | OTTHUMT00000268167.1 | 637 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MSH5-009 | OTTHUMT00000268163.2 | 796 | No protein | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MSH5-022 | OTTHUMT00000355295.1 | 690 | No protein | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MSH5-014 | OTTHUMT00000076249.2 | 688 | No protein | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MSH5-023 | OTTHUMT00000355296.1 | 528 | No protein | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MSH5-016 | OTTHUMT00000268169.1 | 520 | No protein | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
Showing 1 to 20 of 20 entries
