Transcript: VPS16-003 OTTHUMT00000077660.1

Description

vacuolar protein sorting 16 homolog A (S. cerevisiae)

Location

Chromosome 20: 2,840,703-2,866,732 forward strand.

About this transcript

This transcript has 20 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000031714 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
VPS16-001	OTTHUMT00000077658.2	2750	839aa	OTTHUMP00000030047	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13036	Q9H269
VPS16-003	OTTHUMT00000077660.1	2318	695aa	OTTHUMP00000030048	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13037	-
VPS16-005	OTTHUMT00000077662.2	966	274aa	OTTHUMP00000030050	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5JUA9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VPS16-004	OTTHUMT00000077661.2	819	226aa	OTTHUMP00000030049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5JUB0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VPS16-008	OTTHUMT00000077665.2	943	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VPS16-007	OTTHUMT00000077664.1	708	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VPS16-002	OTTHUMT00000077659.1	634	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VPS16-006	OTTHUMT00000077663.2	1825	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 20 Transcript length: 2,318 bps Translation length: 695 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13037

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 29/08/2003)

Alternative symbols

RP11-12M19.2-003

Remarks

FLJ31225

Other assemblies

This transcript maps to 2,840,703-2,866,732 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000380469

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: VPS16-003 OTTHUMT00000077660.1

Summary

Transcript-based displays