Description
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
Location
Chromosome 1: 183,548,941-183,550,088 forward strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTHUMG00000035221 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SMG7-001 | OTTHUMT00000085204.3 | 5970 | 1170aa | OTTHUMP00000033159 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81410 | E9PD50 | |
| SMG7-002 | OTTHUMT00000085432.1 | 5788 | 1137aa | OTTHUMP00000033244 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1355 | Q92540 | |
| SMG7-017 | OTTHUMT00000378572.1 | 5629 | 1091aa | OTTHUMP00000226607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53444 | - | |
| SMG7-010 | OTTHUMT00000358509.1 | 4642 | 1178aa | OTTHUMP00000217155 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41445 | - | |
| SMG7-011 | OTTHUMT00000358510.1 | 3985 | 1145aa | OTTHUMP00000217156 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53445 | - | |
| SMG7-003 | OTTHUMT00000085433.3 | 2483 | 756aa | OTTHUMP00000033245 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1ALB4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMG7-014 | OTTHUMT00000358513.4 | 760 | 150aa | OTTHUMP00000217159 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMG7-013 | OTTHUMT00000358512.2 | 566 | 56aa | OTTHUMP00000217158 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMG7-005 | OTTHUMT00000085435.3 | 1190 | 184aa | OTTHUMP00000033246 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SMG7-015 | OTTHUMT00000358514.1 | 580 | 73aa | OTTHUMP00000217160 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SMG7-016 | OTTHUMT00000358515.1 | 582 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMG7-009 | OTTHUMT00000085480.1 | 556 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMG7-006 | OTTHUMT00000085436.1 | 673 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMG7-004 | OTTHUMT00000085434.1 | 624 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMG7-008 | OTTHUMT00000098685.2 | 328 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
