Transcript: HLA-B-001 OTTHUMT00000089136.2

Description

major histocompatibility complex, class I, B

Location

Chromosome 6-SSTO: 2,642,826-2,646,183 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000036662 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HLA-B-001	OTTHUMT00000089136.2	1589	362aa	OTTHUMP00000034826	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D5H3J5
HLA-B-006	OTTHUMT00000315409.1	1154	241aa	OTTHUMP00000195886	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140T9A9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HLA-B-003	OTTHUMT00000315406.2	738	246aa	OTTHUMP00000195885	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HLA-B-004	OTTHUMT00000315407.2	1008	224aa	OTTHUMP00000233972	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HLA-B-002	OTTHUMT00000315405.1	1085	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-B-007	OTTHUMT00000315410.1	917	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-B-008	OTTHUMT00000315411.1	753	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-B-005	OTTHUMT00000315408.1	588	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,589 bps Translation length: 362 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 21/07/2010 (Created on 27/04/2004)

Alternative symbols

DASS-311G1.2-001

Remarks

FLJ26285

Other assemblies

This transcript maps to 31,347,575-31,350,932 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000421349

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HLA-B-001 OTTHUMT00000089136.2

Summary

Transcript-based displays