Transcript: SSX2IP-007 OTTHUMT00000092676.2

Description

synovial sarcoma, X breakpoint 2 interacting protein

Location

Chromosome 1: 84,666,119-84,690,803 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000009926 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SSX2IP-001	OTTHUMT00000027469.1	5835	614aa	OTTHUMP00000011574	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS699	Q9Y2D8
SSX2IP-008	OTTHUMT00000468712.1	1933	587aa	OTTHUMP00000272760	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53337	-
SSX2IP-009	OTTHUMT00000468713.1	1149	87aa	OTTHUMP00000272761	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SSX2IP-007	OTTHUMT00000092676.2	759	180aa	OTTHUMP00000036083	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SSX2IP-006	OTTHUMT00000092675.3	2457	560aa	OTTHUMP00000036082	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SSX2IP-002	OTTHUMT00000027470.2	2272	504aa	OTTHUMP00000272759	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SSX2IP-003	OTTHUMT00000027471.1	2116	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SSX2IP-004	OTTHUMT00000027472.1	716	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SSX2IP-005	OTTHUMT00000027473.1	453	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 759 bps Translation length: 180 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 13/05/2004)

Alternative symbols

RP11-484D4.2-007

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 84,666,119-84,690,803 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000422026

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SSX2IP-007 OTTHUMT00000092676.2

Summary

Transcript-based displays