Transcript: APH1A-008 OTTHUMT00000095847.2

Description

anterior pharynx defective 1 homolog A (C. elegans)

Location

Chromosome 1: 150,266,645-150,269,023 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000012545 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
APH1A-001	OTTHUMT00000035047.1	2353	247aa	OTTHUMP00000014528	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41391	-
APH1A-002	OTTHUMT00000035048.1	1713	265aa	OTTHUMP00000014529	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41390	Q96BI3
APH1A-008	OTTHUMT00000095847.2	663	150aa	OTTHUMP00000037716	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5TB21	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
APH1A-003	OTTHUMT00000035049.1	1038	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
APH1A-004	OTTHUMT00000035050.1	793	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
APH1A-007	OTTHUMT00000095846.1	585	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
APH1A-005	OTTHUMT00000035051.1	574	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
APH1A-006	OTTHUMT00000035052.1	447	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 663 bps Translation length: 150 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 20/05/2004)

Alternative symbols

RP4-790G17.3-008

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 150,266,645-150,269,023 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000236017

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: APH1A-008 OTTHUMT00000095847.2

Summary

Transcript-based displays