Transcript: PRCC-001 OTTHUMT00000098941.3

Description

papillary renal cell carcinoma (translocation-associated)

Location

Chromosome 1: 156,767,500-156,800,817 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000041294 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRCC-001	OTTHUMT00000098941.3	2105	491aa	OTTHUMP00000038719	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1157	Q92733
PRCC-004	OTTHUMT00000098944.1	1084	257aa	OTTHUMP00000038720	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PRCC-008	OTTHUMT00000393261.1	634	198aa	OTTHUMP00000235235	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PRCC-007	OTTHUMT00000393260.1	1719	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PRCC-006	OTTHUMT00000099426.1	833	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PRCC-003	OTTHUMT00000098943.1	452	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PRCC-002	OTTHUMT00000098942.1	1969	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRCC-005	OTTHUMT00000098945.1	557	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,105 bps Translation length: 491 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS1157

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/03/2014 (Created on 10/06/2004)

Alternative symbols

RP11-66D17.11-001

Other assemblies

This transcript maps to 156,767,500-156,800,817 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000271526

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: PRCC-001 OTTHUMT00000098941.3

Summary

Transcript-based displays