Description
MCF.2 cell line derived transforming sequence-like
Location
Chromosome 13: 113,044,462-113,045,322 forward strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTHUMG00000017377 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| MCF2L-005 | OTTHUMT00000045853.4 | 3752 | 1125aa | OTTHUMP00000179106 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45070 | - | |
| MCF2L-003 | OTTHUMT00000045851.1 | 3413 | 984aa | OTTHUMP00000018742 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81782 | - | |
| MCF2L-002 | OTTHUMT00000045850.3 | 6580 | 1096aa | OTTHUMP00000018741 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| MCF2L-033 | OTTHUMT00000328515.1 | 3903 | 793aa | OTTHUMP00000202677 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BYP9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-001 | OTTHUMT00000045849.4 | 3648 | 1137aa | OTTHUMP00000018740 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | O15068 | |
| MCF2L-024 | OTTHUMT00000156138.5 | 3560 | 1067aa | OTTHUMP00000081739 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| MCF2L-034 | OTTHUMT00000339076.1 | 2419 | 296aa | OTTHUMP00000207579 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-029 | OTTHUMT00000277047.1 | 1819 | 336aa | OTTHUMP00000179105 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-015 | OTTHUMT00000045863.2 | 1544 | 64aa | OTTHUMP00000179089 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| MCF2L-011 | OTTHUMT00000045859.3 | 952 | 317aa | OTTHUMP00000179109 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| MCF2L-023 | OTTHUMT00000127245.2 | 734 | 213aa | OTTHUMP00000179113 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-007 | OTTHUMT00000045855.3 | 576 | 86aa | OTTHUMP00000179107 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| MCF2L-030 | OTTHUMT00000277048.3 | 574 | 136aa | OTTHUMP00000202658 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MCF2L-010 | OTTHUMT00000045858.5 | 566 | 189aa | OTTHUMP00000179108 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| MCF2L-025 | OTTHUMT00000277019.2 | 557 | 97aa | OTTHUMP00000179088 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MCF2L-018 | OTTHUMT00000045866.2 | 490 | 136aa | OTTHUMP00000179112 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| MCF2L-012 | OTTHUMT00000045860.3 | 453 | 151aa | OTTHUMP00000179110 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| MCF2L-008 | OTTHUMT00000045856.4 | 399 | 69aa | OTTHUMP00000269520 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-014 | OTTHUMT00000045862.2 | 370 | 87aa | OTTHUMP00000202656 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-019 | OTTHUMT00000045867.5 | 361 | 93aa | OTTHUMP00000269519 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| MCF2L-004 | OTTHUMT00000045852.3 | 2725 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MCF2L-016 | OTTHUMT00000045864.3 | 2710 | 66aa | OTTHUMP00000199960 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| MCF2L-032 | OTTHUMT00000277050.1 | 5727 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MCF2L-006 | OTTHUMT00000045854.3 | 896 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MCF2L-022 | OTTHUMT00000127244.1 | 616 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MCF2L-026 | OTTHUMT00000277020.1 | 604 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MCF2L-020 | OTTHUMT00000045868.1 | 3205 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MCF2L-021 | OTTHUMT00000127243.1 | 3027 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MCF2L-009 | OTTHUMT00000045857.1 | 720 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MCF2L-028 | OTTHUMT00000277022.1 | 573 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MCF2L-027 | OTTHUMT00000277021.1 | 553 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MCF2L-031 | OTTHUMT00000277049.2 | 548 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
