Transcript: CNOT3-010 OTTHUMT00000142137.3

Description

CCR4-NOT transcription complex, subunit 3

Location

Chromosome 19: 54,149,730-54,153,819 forward strand.

About this transcript

This transcript has 5 exons.

Gene

This transcript is a product of gene OTTHUMG00000066468 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
CNOT3-003	OTTHUMT00000142130.5	4118	753aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12880	A0A024R4R3
CNOT3-001	OTTHUMT00000142117.3	2852	753aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12880	A0A024R4R3
CNOT3-006	OTTHUMT00000142133.3	1269	288aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y5X7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CNOT3-009	OTTHUMT00000142136.2	1125	375aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C148	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
CNOT3-011	OTTHUMT00000348595.1	541	88aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C5J4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CNOT3-004	OTTHUMT00000142131.2	2121	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CNOT3-005	OTTHUMT00000142132.4	2778	106aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C3F5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CNOT3-010	OTTHUMT00000142137.3	784	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CNOT3-002	OTTHUMT00000142129.3	4516	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CNOT3-007	OTTHUMT00000142134.2	2047	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Loading component

Statistics

Exons: 5 Transcript length: 784 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 07/02/2005)

Alternative symbols

AC012314.9-010

Other assemblies

This transcript maps to 54,149,730-54,153,819 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000496327

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CNOT3-010 OTTHUMT00000142137.3

Summary

Transcript-based displays