Transcript: COL4A3BP-001 OTTHUMT00000219874.3

Description

collagen, type IV, alpha 3 (Goodpasture antigen) binding protein

Location

Chromosome 5: 75,371,103-75,512,138 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000102068 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL4A3BP-001	OTTHUMT00000219874.3	5651	752aa	OTTHUMP00000128247	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47235	-
COL4A3BP-002	OTTHUMT00000219875.2	2843	624aa	OTTHUMP00000128248	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4028	Q9Y5P4
COL4A3BP-003	OTTHUMT00000219876.2	2262	598aa	OTTHUMP00000128249	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4029	A0A024RAJ5
COL4A3BP-007	OTTHUMT00000369123.2	886	234aa	OTTHUMP00000222113	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A0MRE4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL4A3BP-005	OTTHUMT00000369121.1	693	126aa	OTTHUMP00000222112	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y9J1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL4A3BP-004	OTTHUMT00000369120.1	2155	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
COL4A3BP-006	OTTHUMT00000369122.1	508	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL4A3BP-008	OTTHUMT00000469997.1	3355	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 5,651 bps Translation length: 752 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47235

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 28/09/2005)

Alternative symbols

AC008897.2-001

Remarks

NP_001123577.1

Other assemblies

This transcript maps to 75,371,103-75,512,138 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000380494

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: COL4A3BP-001 OTTHUMT00000219874.3

Summary

Transcript-based displays