Description
ATG12 autophagy related 12 homolog (S. cerevisiae)
Location
Chromosome 5: 115,828,200-115,841,858 reverse strand.
About this transcript
This transcript has 4 exons and is annotated with 5 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000128889 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ATG12-001 | OTTHUMT00000250851.3 | 4333 | 140aa | OTTHUMP00000159129 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4122 | C1IDX9 | |
| ATG12-003 | OTTHUMT00000359542.1 | 1430 | 74aa | OTTHUMP00000217729 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS64222 | - | |
| ATG12-006 | OTTHUMT00000359545.1 | 1930 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ATG12-002 | OTTHUMT00000359541.1 | 1558 | 56aa | OTTHUMP00000217728 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ATG12-007 | OTTHUMT00000359546.1 | 1082 | 75aa | OTTHUMP00000217730 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ATG12-009 | OTTHUMT00000359548.1 | 773 | 66aa | OTTHUMP00000217732 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG12-008 | OTTHUMT00000359547.1 | 732 | 59aa | OTTHUMP00000217731 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG12-004 | OTTHUMT00000359543.1 | 2106 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG12-014 | OTTHUMT00000359553.1 | 692 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG12-010 | OTTHUMT00000359549.1 | 553 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG12-005 | OTTHUMT00000359544.1 | 3274 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG12-012 | OTTHUMT00000359551.2 | 1211 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG12-013 | OTTHUMT00000359552.1 | 807 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG12-011 | OTTHUMT00000359550.1 | 567 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
