Transcript: XRCC5-001 OTTHUMT00000256675.3

Description

X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)

Location

Chromosome 2: 216,107,464-216,206,303 forward strand.

About this transcript

This transcript has 23 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000133059 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
XRCC5-001	OTTHUMT00000256675.3	3761	732aa	OTTHUMP00000164061	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2402	P13010
XRCC5-003	OTTHUMT00000337287.3	605	131aa	OTTHUMP00000206788	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JZ81	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
XRCC5-006	OTTHUMT00000337290.1	415	19aa	OTTHUMP00000206790	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
XRCC5-008	OTTHUMT00000337292.1	610	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
XRCC5-005	OTTHUMT00000337289.2	576	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
XRCC5-010	OTTHUMT00000337294.1	2962	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
XRCC5-009	OTTHUMT00000337293.1	616	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
XRCC5-004	OTTHUMT00000337288.1	610	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
XRCC5-007	OTTHUMT00000337291.1	564	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 23 Transcript length: 3,761 bps Translation length: 732 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2402

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 19/01/2006)

Alternative symbols

AC012513.2-001

Other assemblies

This transcript maps to 216,107,464-216,206,303 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000392133

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: XRCC5-001 OTTHUMT00000256675.3

Summary

Transcript-based displays