Transcript: HLA-DOB-004 OTTHUMT00000276178.2

Description

major histocompatibility complex, class II, DO beta

Location

About this transcript

This transcript has 3 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HLA-DOB-001	OTTHUMT00000076439.1	1372	273aa	OTTHUMP00000029312	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4754	Q5QNS2
HLA-DOB-004	OTTHUMT00000276178.2	543	181aa	OTTHUMP00000178598	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140T9L2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
HLA-DOB-003	OTTHUMT00000076440.3	1188	38aa	OTTHUMP00000233966	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HLA-DOB-002	OTTHUMT00000276177.1	1514	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 543 bps Translation length: 181 residues

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 14/08/2006)

Alternative symbols

XXbac-BPG246D15.4-004

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 32,814,370-32,816,910 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000447394

Curation Method

Manual annotation from Havana