Description
collagen, type XXVII, alpha 1
Location
Chromosome 9: 114,240,220-114,246,121 forward strand.
About this transcript
This transcript has 5 exons.
Gene
This transcript is a product of gene OTTHUMG00000020537 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| COL27A1-001 | OTTHUMT00000053763.1 | 7790 | 1860aa | OTTHUMP00000021970 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6802 | Q8IZC6 | |
| COL27A1-004 | OTTHUMT00000053766.1 | 2865 | 714aa | OTTHUMP00000021972 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COL27A1-002 | OTTHUMT00000053764.3 | 5329 | 485aa | OTTHUMP00000233716 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COL27A1-006 | OTTHUMT00000315894.2 | 3991 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL27A1-003 | OTTHUMT00000053765.2 | 1946 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL27A1-008 | OTTHUMT00000315896.1 | 666 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL27A1-007 | OTTHUMT00000315895.1 | 514 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL27A1-005 | OTTHUMT00000315893.1 | 463 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
