Transcript: HMGXB4-002 OTTHUMT00000318104.2

Description

HMG box domain containing 4

Location

Chromosome 22: 35,257,498-35,295,764 forward strand.

About this transcript

This transcript has 11 exons and is annotated with 19 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150439 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HMGXB4-002	OTTHUMT00000318104.2	4047	601aa	OTTHUMP00000197368	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33641	Q9UGU5
HMGXB4-003	OTTHUMT00000318105.4	1325	284aa	OTTHUMP00000198801	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMGXB4-004	OTTHUMT00000318106.4	1257	285aa	OTTHUMP00000198802	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMGXB4-001	OTTHUMT00000318103.2	4216	92aa	OTTHUMP00000197367	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HMGXB4-005	OTTHUMT00000318107.1	575	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HMGXB4-006	OTTHUMT00000318108.1	867	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HMGXB4-008	OTTHUMT00000318110.1	778	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HMGXB4-007	OTTHUMT00000318109.1	559	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 4,047 bps Translation length: 601 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33641

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 06/08/2007)

Alternative symbols

RP3-510H16.2-002

Other assemblies

This transcript maps to 35,257,498-35,295,764 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000216106

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HMGXB4-002 OTTHUMT00000318104.2

Summary

Transcript-based displays