Transcript: ST13-004 OTTHUMT00000321762.1

Description

suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)

Location

About this transcript

This transcript has 7 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ST13-001	OTTHUMT00000321759.1	3595	369aa	OTTHUMP00000199376	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14006	A0A140VKA6
ST13-003	OTTHUMT00000321761.2	549	162aa	OTTHUMP00000199378	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6VDH7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ST13-002	OTTHUMT00000321760.1	798	38aa	OTTHUMP00000199377	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST13-004	OTTHUMT00000321762.1	630	146aa	OTTHUMP00000199379	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST13-005	OTTHUMT00000321763.1	592	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST13-006	OTTHUMT00000321764.1	425	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 630 bps Translation length: 146 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 15/11/2007)

Alternative symbols

RP3-408N23.5-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 40,830,875-40,844,890 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000413424

Curation Method

Manual annotation from Havana