Transcript: EPCAM-003 OTTHUMT00000323638.1

Description

epithelial cell adhesion molecule

Location

About this transcript

This transcript has 11 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
EPCAM-001	OTTHUMT00000250792.2	1724	314aa	OTTHUMP00000159073	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1833	P16422
EPCAM-002	OTTHUMT00000323354.4	1530	342aa	OTTHUMP00000200307	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B5MCA4
EPCAM-006	OTTHUMT00000323641.2	609	199aa	OTTHUMP00000200427	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
EPCAM-003	OTTHUMT00000323638.1	1501	342aa	OTTHUMP00000200426	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	B5MCA4
EPCAM-005	OTTHUMT00000323640.1	752	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
EPCAM-004	OTTHUMT00000323639.1	714	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 1,501 bps Translation length: 342 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 21/01/2008)

Alternative symbols

AC079775.1-003

Other assemblies

This transcript maps to 47,345,163-47,387,601 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000456133

Curation Method

Manual annotation from Havana