Transcript: ST3GAL5-010 OTTHUMT00000329826.2

Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 5

Location

Chromosome 2: 85,839,210-85,889,037 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130171 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ST3GAL5-001	OTTHUMT00000252486.2	4431	418aa	OTTHUMP00000160672	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1986	Q9UNP4
ST3GAL5-002	OTTHUMT00000252487.2	2236	395aa	OTTHUMP00000160673	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS42705	-
ST3GAL5-064	OTTHUMT00000491829.1	2467	437aa	OTTHUMP00000283520	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-033	OTTHUMT00000491801.1	2465	390aa	OTTHUMP00000283498	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-065	OTTHUMT00000491828.1	2368	390aa	OTTHUMP00000283519	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-003	OTTHUMT00000252488.2	2344	390aa	OTTHUMP00000160674	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0S2Z4S6
ST3GAL5-023	OTTHUMT00000491797.2	2331	390aa	OTTHUMP00000283494	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-066	OTTHUMT00000491833.1	2297	390aa	OTTHUMP00000283522	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-032	OTTHUMT00000491802.1	2292	390aa	OTTHUMP00000283499	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-026	OTTHUMT00000491792.2	2165	378aa	OTTHUMP00000283490	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-070	OTTHUMT00000491836.1	2160	407aa	OTTHUMP00000283525	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-015	OTTHUMT00000491786.1	2131	365aa	OTTHUMP00000283483	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-044	OTTHUMT00000491816.1	2034	337aa	OTTHUMP00000283511	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ST3GAL5-004	OTTHUMT00000329820.2	530	139aa	OTTHUMP00000203244	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JYS9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ST3GAL5-019	OTTHUMT00000491790.1	455	37aa	OTTHUMP00000283488	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ST3GAL5-018	OTTHUMT00000491788.1	2194	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ST3GAL5-014	OTTHUMT00000491787.2	4594	61aa	OTTHUMP00000283484	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-034	OTTHUMT00000491804.2	2995	110aa	OTTHUMP00000283501	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-060	OTTHUMT00000491837.1	2967	107aa	OTTHUMP00000283526	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-010	OTTHUMT00000329826.2	2940	114aa	OTTHUMP00000283485	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-016	OTTHUMT00000491800.2	2848	138aa	OTTHUMP00000283497	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-061	OTTHUMT00000491834.1	2844	110aa	OTTHUMP00000283523	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-041	OTTHUMT00000491815.1	2837	47aa	OTTHUMP00000283510	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-047	OTTHUMT00000491814.1	2622	47aa	OTTHUMP00000283509	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-029	OTTHUMT00000491799.4	2597	112aa	OTTHUMP00000283496	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-006	OTTHUMT00000329822.2	2489	47aa	OTTHUMP00000203245	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-012	OTTHUMT00000329828.4	2457	112aa	OTTHUMP00000203248	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E7EPY0
ST3GAL5-037	OTTHUMT00000491809.2	2434	107aa	OTTHUMP00000283506	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-040	OTTHUMT00000491812.1	2410	47aa	OTTHUMP00000283507	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-030	OTTHUMT00000491784.1	2407	49aa	OTTHUMP00000283482	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-036	OTTHUMT00000491805.1	2405	14aa	OTTHUMP00000283502	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-031	OTTHUMT00000491803.1	2369	247aa	OTTHUMP00000283500	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-067	OTTHUMT00000491835.1	2356	184aa	OTTHUMP00000283524	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-024	OTTHUMT00000491791.1	2347	107aa	OTTHUMP00000283489	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-062	OTTHUMT00000491838.1	2318	107aa	OTTHUMP00000283527	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-038	OTTHUMT00000491808.1	2298	47aa	OTTHUMP00000283505	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-021	OTTHUMT00000491796.2	2180	149aa	OTTHUMP00000283493	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-056	OTTHUMT00000491825.1	2173	104aa	OTTHUMP00000283517	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-043	OTTHUMT00000491817.1	2169	135aa	OTTHUMP00000283512	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-057	OTTHUMT00000491824.1	2168	149aa	OTTHUMP00000283516	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-069	OTTHUMT00000491832.1	2140	78aa	OTTHUMP00000283521	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-048	OTTHUMT00000491818.1	2129	39aa	OTTHUMP00000283513	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-042	OTTHUMT00000491813.1	2095	47aa	OTTHUMP00000283508	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-027	OTTHUMT00000491793.2	2064	231aa	OTTHUMP00000283491	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-053	OTTHUMT00000491823.1	1890	223aa	OTTHUMP00000283515	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-035	OTTHUMT00000491806.1	1546	47aa	OTTHUMP00000283503	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-068	OTTHUMT00000491839.1	1300	73aa	OTTHUMP00000283528	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-055	OTTHUMT00000491826.1	1201	18aa	OTTHUMP00000283518	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-007	OTTHUMT00000329823.3	1085	220aa	OTTHUMP00000283487	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-052	OTTHUMT00000491822.2	1032	103aa	OTTHUMP00000283514	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-039	OTTHUMT00000491807.1	888	41aa	OTTHUMP00000283504	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-020	OTTHUMT00000491789.1	779	43aa	OTTHUMP00000283486	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-025	OTTHUMT00000491794.1	582	73aa	OTTHUMP00000283492	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ST3GAL5-022	OTTHUMT00000491798.1	544	47aa	OTTHUMP00000283495	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ST3GAL5-049	OTTHUMT00000491811.1	3722	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-013	OTTHUMT00000329829.1	3487	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-045	OTTHUMT00000491819.1	1643	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-058	OTTHUMT00000491840.1	1203	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-008	OTTHUMT00000329824.3	871	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-054	OTTHUMT00000491827.1	803	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-005	OTTHUMT00000329821.2	478	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ST3GAL5-050	OTTHUMT00000491810.2	6180	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-009	OTTHUMT00000329825.2	5918	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-017	OTTHUMT00000491785.1	4598	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-063	OTTHUMT00000491830.1	4478	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-059	OTTHUMT00000491831.1	4001	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-051	OTTHUMT00000491821.2	3062	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-046	OTTHUMT00000491820.1	2047	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-011	OTTHUMT00000329827.2	588	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ST3GAL5-028	OTTHUMT00000491795.1	563	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 2,940 bps Translation length: 114 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 29/06/2016 (Created on 03/06/2008)

Alternative symbols

AC011236.6-010

Other assemblies

This transcript maps to 85,839,210-85,889,037 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000638956

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ST3GAL5-010 OTTHUMT00000329826.2

Summary

Transcript-based displays