Description
ATG16 autophagy related 16-like 1 (S. cerevisiae)
Location
Chromosome 2: 233,274,304-233,281,114 forward strand.
About this transcript
This transcript has 3 exons.
Gene
This transcript is a product of gene OTTHUMG00000133619 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ATG16L1-001 | OTTHUMT00000257069.2 | 3405 | 607aa | OTTHUMP00000164391 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2503 | Q676U5 | |
| ATG16L1-003 | OTTHUMT00000257071.2 | 3213 | 588aa | OTTHUMP00000164393 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2502 | - | |
| ATG16L1-005 | OTTHUMT00000259067.1 | 3313 | 624aa | OTTHUMP00000165877 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| ATG16L1-004 | OTTHUMT00000259066.1 | 2767 | 428aa | OTTHUMP00000165876 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| ATG16L1-007 | OTTHUMT00000259069.2 | 691 | 177aa | OTTHUMP00000165879 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG16L1-013 | OTTHUMT00000330176.2 | 684 | 187aa | OTTHUMP00000203410 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG16L1-006 | OTTHUMT00000259068.2 | 644 | 164aa | OTTHUMP00000165878 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG16L1-012 | OTTHUMT00000330175.2 | 589 | 55aa | OTTHUMP00000203409 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATG16L1-011 | OTTHUMT00000330174.1 | 1771 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ATG16L1-002 | OTTHUMT00000257070.2 | 3301 | 38aa | OTTHUMP00000164392 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ATG16L1-015 | OTTHUMT00000330178.1 | 740 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG16L1-017 | OTTHUMT00000330180.1 | 560 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATG16L1-008 | OTTHUMT00000259070.1 | 4208 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG16L1-009 | OTTHUMT00000259071.1 | 3559 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG16L1-018 | OTTHUMT00000330181.1 | 911 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG16L1-019 | OTTHUMT00000330182.1 | 805 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG16L1-016 | OTTHUMT00000330179.1 | 591 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATG16L1-014 | OTTHUMT00000330177.1 | 568 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
