Description
sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
Location
Chromosome 2: 130,152,746-130,157,255 reverse strand.
About this transcript
This transcript has 7 exons and is annotated with 4 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000131624 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SMPD4-001 | OTTHUMT00000254516.3 | 4896 | 866aa | OTTHUMP00000162391 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42751 | Q9NXE4 | |
| SMPD4-002 | OTTHUMT00000254517.4 | 3661 | 837aa | OTTHUMP00000162392 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2156 | H7BXF4 | |
| SMPD4-004 | OTTHUMT00000303985.1 | 3371 | 741aa | OTTHUMP00000190862 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C1Q6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMPD4-014 | OTTHUMT00000332195.3 | 940 | 313aa | OTTHUMP00000204320 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C0W5 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SMPD4-015 | OTTHUMT00000332196.9 | 820 | 274aa | OTTHUMP00000204321 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C2J2 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SMPD4-016 | OTTHUMT00000332197.9 | 796 | 265aa | OTTHUMP00000204322 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C2E2 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SMPD4-020 | OTTHUMT00000332201.2 | 699 | 135aa | OTTHUMP00000204324 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J647 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMPD4-009 | OTTHUMT00000303990.2 | 635 | 211aa | OTTHUMP00000190863 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C235 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SMPD4-013 | OTTHUMT00000332194.2 | 3601 | 57aa | OTTHUMP00000204319 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F2Z2W5 | |
| SMPD4-011 | OTTHUMT00000332000.3 | 3586 | 50aa | OTTHUMP00000204283 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WF03 | |
| SMPD4-012 | OTTHUMT00000332001.2 | 3335 | 56aa | OTTHUMP00000204284 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F2Z2I0 | |
| SMPD4-010 | OTTHUMT00000303991.3 | 842 | 88aa | OTTHUMP00000204326 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WEQ5 | |
| SMPD4-019 | OTTHUMT00000332200.1 | 566 | 56aa | OTTHUMP00000204323 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F2Z2I0 | |
| SMPD4-017 | OTTHUMT00000332198.1 | 555 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMPD4-018 | OTTHUMT00000332199.1 | 547 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMPD4-005 | OTTHUMT00000303986.1 | 4298 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMPD4-006 | OTTHUMT00000303987.1 | 2570 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMPD4-008 | OTTHUMT00000303989.1 | 659 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMPD4-007 | OTTHUMT00000303988.2 | 593 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
