Transcript: FSIP2-004 OTTHUMT00000334512.3

Description

fibrous sheath interacting protein 2

Location

Chromosome 2: 185,794,618-185,833,289 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000153874 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
FSIP2-001	OTTHUMT00000332778.3	20788	6907aa	OTTHUMP00000204537	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54426	Q5CZC0
FSIP2-005	OTTHUMT00000334513.1	3881	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
FSIP2-004	OTTHUMT00000334512.3	3869	973aa	OTTHUMP00000205368	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
FSIP2-003	OTTHUMT00000334511.3	2726	136aa	OTTHUMP00000205367	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
FSIP2-007	OTTHUMT00000334514.1	348	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
FSIP2-008	OTTHUMT00000334515.1	858	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 3,869 bps Translation length: 973 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 20/08/2008)

Alternative symbols

AC008174.2-004

Remarks

FLJ44048

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 185,794,618-185,833,289 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000415915

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: FSIP2-004 OTTHUMT00000334512.3

Summary

Transcript-based displays