Transcript: CTDSPL-009 OTTHUMT00000342398.2

Description

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

Location

Chromosome 3: 37,975,773-37,982,384 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000155942 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CTDSPL-002	OTTHUMT00000342399.1	4640	265aa	OTTHUMP00000208948	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33735	-
CTDSPL-001	OTTHUMT00000342392.1	4459	276aa	OTTHUMP00000208947	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33734	O15194
CTDSPL-009	OTTHUMT00000342398.2	804	103aa	OTTHUMP00000209815	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CTDSPL-008	OTTHUMT00000342397.2	793	196aa	OTTHUMP00000209814	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C2S4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CTDSPL-007	OTTHUMT00000342396.2	368	93aa	OTTHUMP00000209813	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CTDSPL-003	OTTHUMT00000342391.1	371	55aa	OTTHUMP00000208946	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CTDSPL-005	OTTHUMT00000342394.1	1482	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CTDSPL-004	OTTHUMT00000342393.1	609	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 3 Transcript length: 804 bps Translation length: 103 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 24/11/2008)

Alternative symbols

AC105752.1-009

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 37,975,773-37,982,384 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000436654

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CTDSPL-009 OTTHUMT00000342398.2

Summary

Transcript-based displays