Transcript: XYLB-002 OTTHUMT00000342776.1

Description

xylulokinase homolog (H. influenzae)

Location

About this transcript

This transcript has 17 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
XYLB-001	OTTHUMT00000254062.2	3664	536aa	OTTHUMP00000161968	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2678	O75191
XYLB-003	OTTHUMT00000342777.1	1666	66aa	OTTHUMP00000209089	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
XYLB-004	OTTHUMT00000342778.1	1965	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
XYLB-002	OTTHUMT00000342776.1	3484	61aa	OTTHUMP00000209088	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
XYLB-006	OTTHUMT00000342780.1	546	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
XYLB-005	OTTHUMT00000342779.1	365	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 17 Transcript length: 3,484 bps Translation length: 61 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 27/11/2008)

Alternative symbols

AP006191.1-002

Other assemblies

This transcript maps to 38,346,808-38,414,976 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000424034

Curation Method

Manual annotation from Havana