Transcript: FYCO1-003 OTTHUMT00000344603.1

Description

FYVE and coiled-coil domain containing 1

Location

Chromosome 3: 45,917,904-45,958,572 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000133447 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
FYCO1-001	OTTHUMT00000257320.2	8504	1478aa	OTTHUMP00000164650	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2734	Q9BQS8
FYCO1-003	OTTHUMT00000344603.1	4317	267aa	OTTHUMP00000210096	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZ74	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
FYCO1-006	OTTHUMT00000344606.2	1072	149aa	OTTHUMP00000210097	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J2W6
FYCO1-004	OTTHUMT00000344604.1	3164	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
FYCO1-007	OTTHUMT00000345362.1	2103	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
FYCO1-002	OTTHUMT00000344602.2	1365	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
FYCO1-005	OTTHUMT00000344605.1	545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 4,317 bps Translation length: 267 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 07/01/2009)

Alternative symbols

AC099539.4-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 45,917,904-45,958,572 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000433878

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: FYCO1-003 OTTHUMT00000344603.1

Summary

Transcript-based displays