Transcript: TSPAN12-004 OTTHUMT00000346954.3

Description

tetraspanin 12

Location

Chromosome 7: 120,838,777-120,858,402 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000156980 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TSPAN12-001	OTTHUMT00000346951.2	2798	305aa	OTTHUMP00000211223	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5777	O95859
TSPAN12-002	OTTHUMT00000346952.1	1495	305aa	OTTHUMP00000211224	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5777	O95859
TSPAN12-004	OTTHUMT00000346954.3	693	95aa	OTTHUMP00000211226	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JQM0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TSPAN12-006	OTTHUMT00000346956.2	569	112aa	OTTHUMP00000211228	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JC05	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TSPAN12-005	OTTHUMT00000346955.3	551	120aa	OTTHUMP00000211227	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9IZ82	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TSPAN12-007	OTTHUMT00000346957.2	551	147aa	OTTHUMP00000211229	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J9U1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TSPAN12-003	OTTHUMT00000346953.1	1167	42aa	OTTHUMP00000211225	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C0X9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 5 Transcript length: 693 bps Translation length: 95 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 10/02/2009)

Alternative symbols

RP5-1100F23.1-004

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 120,838,777-120,858,402 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000430985

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TSPAN12-004 OTTHUMT00000346954.3

Summary

Transcript-based displays