Transcript: CSMD3-001 OTTHUMT00000347141.1

Description

CUB and Sushi multiple domains 3

Location

Chromosome 8: 112,222,928-113,437,099 reverse strand.

About this transcript

This transcript has 71 exons and is annotated with 220 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000157027 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CSMD3-001	OTTHUMT00000347141.1	13212	3707aa	OTTHUMP00000211322	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6315	Q7Z407
CSMD3-006	OTTHUMT00000347146.1	13018	3667aa	OTTHUMP00000211324	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6317	-
CSMD3-002	OTTHUMT00000347142.1	12485	3538aa	OTTHUMP00000211323	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6316	-
CSMD3-007	OTTHUMT00000347147.1	10773	2977aa	OTTHUMP00000211325	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BXX0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CSMD3-010	OTTHUMT00000381672.1	452	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CSMD3-005	OTTHUMT00000347145.1	5703	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CSMD3-011	OTTHUMT00000381796.1	2486	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CSMD3-008	OTTHUMT00000347148.1	1830	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CSMD3-003	OTTHUMT00000347143.2	1406	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CSMD3-009	OTTHUMT00000347149.1	457	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 71 Transcript length: 13,212 bps Translation length: 3,707 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6315

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 11/02/2009)

Alternative symbols

RP11-3A12.1-001

Remarks

NP_937756.1

signal at the upstream start site

Other assemblies

This transcript maps to 112,222,928-113,437,099 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000297405

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CSMD3-001 OTTHUMT00000347141.1

Summary

Transcript-based displays