Transcript: LMO2-001 OTTHUMT00000347776.1

Description

LIM domain only 2 (rhombotin-like 1)

Location

About this transcript

This transcript has 6 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
LMO2-001	OTTHUMT00000347776.1	2294	227aa	OTTHUMP00000211640	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7888	-
LMO2-002	OTTHUMT00000347777.1	1687	158aa	OTTHUMP00000211641	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44567	P25791
LMO2-003	OTTHUMT00000347778.1	1519	55aa	OTTHUMP00000211642	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LMO2-005	OTTHUMT00000347780.1	390	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LMO2-004	OTTHUMT00000347779.1	1550	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LMO2-006	OTTHUMT00000347781.1	869	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,294 bps Translation length: 227 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7888

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 18/02/2009)

Alternative symbols

RP11-646J21.1-001

Remarks

NP_005565.2

Other assemblies

This transcript maps to 33,858,576-33,892,289 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000257818

Curation Method

Manual annotation from Havana