Transcript: PUS7-001 OTTHUMT00000348680.1

Description

pseudouridylate synthase 7 homolog (S. cerevisiae)

Location

About this transcript

This transcript has 16 exons and is annotated with 14 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PUS7-002	OTTHUMT00000348681.1	3480	661aa	OTTHUMP00000212075	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34725	Q96PZ0
PUS7-001	OTTHUMT00000348680.1	2356	661aa	OTTHUMP00000212074	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34725	Q96PZ0
PUS7-006	OTTHUMT00000348685.2	395	132aa	OTTHUMP00000212077	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y863	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PUS7-003	OTTHUMT00000348682.1	2436	448aa	OTTHUMP00000212076	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E7EUH7
PUS7-005	OTTHUMT00000348684.1	620	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PUS7-004	OTTHUMT00000348683.1	275	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 2,356 bps Translation length: 661 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34725

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 05/03/2009)

Alternative symbols

RP11-708P17.1-001

Other assemblies

This transcript maps to 105,457,659-105,522,258 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000469408

Curation Method

Manual annotation from Havana