Transcript: SMO-004 OTTHUMT00000350989.1

Description

smoothened homolog (Drosophila)

Location

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMO-001	OTTHUMT00000350986.1	3738	787aa	OTTHUMP00000212929	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5811	Q99835
SMO-003	OTTHUMT00000350988.2	787	151aa	OTTHUMP00000212930	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C509	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMO-004	OTTHUMT00000350989.1	582	70aa	OTTHUMP00000212931	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C5S9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMO-002	OTTHUMT00000350987.1	732	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 582 bps Translation length: 70 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 31/03/2009)

Alternative symbols

RP11-286H14.7-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 129,210,508-129,212,152 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000475779

Curation Method

Manual annotation from Havana