Transcript: SLC33A1-005 OTTHUMT00000351172.1

Description

solute carrier family 33 (acetyl-CoA transporter), member 1

Location

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC33A1-002	OTTHUMT00000351130.3	9217	549aa	OTTHUMP00000212982	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3173	O00400
SLC33A1-001	OTTHUMT00000351129.2	2404	549aa	OTTHUMP00000212981	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3173	O00400
SLC33A1-003	OTTHUMT00000351131.1	1060	269aa	OTTHUMP00000212983	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C562	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SLC33A1-006	OTTHUMT00000351173.2	555	185aa	OTTHUMP00000213000	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C577	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SLC33A1-005	OTTHUMT00000351172.1	764	109aa	OTTHUMP00000212999	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SLC33A1-004	OTTHUMT00000351171.1	499	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 764 bps Translation length: 109 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 02/04/2009)

Alternative symbols

RP11-674E16.2-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 155,828,228-155,853,317 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000468581

Curation Method

Manual annotation from Havana