Description
5'-3' exoribonuclease 1
Location
Chromosome 3: 142,422,635-142,429,774 reverse strand.
About this transcript
This transcript has 7 exons and is annotated with 3 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000159251 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| XRN1-001 | OTTHUMT00000354087.2 | 10143 | 1706aa | OTTHUMP00000214507 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3123 | Q8IZH2 | |
| XRN1-004 | OTTHUMT00000354200.1 | 5383 | 1694aa | OTTHUMP00000214577 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS63801 | - | |
| XRN1-003 | OTTHUMT00000354199.1 | 2075 | 459aa | OTTHUMP00000214576 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75028 | - | |
| XRN1-006 | OTTHUMT00000354202.2 | 5600 | 1160aa | OTTHUMP00000214578 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| XRN1-009 | OTTHUMT00000354305.2 | 686 | 165aa | OTTHUMP00000214639 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JCZ8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| XRN1-002 | OTTHUMT00000354198.1 | 1180 | 107aa | OTTHUMP00000214575 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WDA0 | |
| XRN1-012 | OTTHUMT00000354308.1 | 393 | 63aa | OTTHUMP00000214640 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| XRN1-008 | OTTHUMT00000354304.1 | 643 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| XRN1-013 | OTTHUMT00000354309.2 | 318 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| XRN1-005 | OTTHUMT00000354201.1 | 2652 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| XRN1-014 | OTTHUMT00000354310.1 | 674 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| XRN1-007 | OTTHUMT00000354303.1 | 669 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| XRN1-011 | OTTHUMT00000354307.1 | 420 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| XRN1-010 | OTTHUMT00000354306.1 | 322 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
