Transcript: ATP6V1A-006 OTTHUMT00000354462.2

Description

ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A

Location

Chromosome 3: 113,747,042-113,786,320 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159295 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ATP6V1A-001	OTTHUMT00000354457.1	4591	617aa	OTTHUMP00000214746	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2976	P38606
ATP6V1A-005	OTTHUMT00000354461.2	754	221aa	OTTHUMP00000214748	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JVW8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATP6V1A-006	OTTHUMT00000354462.2	710	184aa	OTTHUMP00000214749	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JA17	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATP6V1A-003	OTTHUMT00000354459.1	1525	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ATP6V1A-002	OTTHUMT00000354458.1	2266	49aa	OTTHUMP00000214747	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ATP6V1A-007	OTTHUMT00000354463.1	542	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATP6V1A-004	OTTHUMT00000354460.1	509	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 710 bps Translation length: 184 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 20/05/2009)

Alternative symbols

RP11-435F17.2-006

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 113,747,042-113,786,320 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000496747

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ATP6V1A-006 OTTHUMT00000354462.2

Summary

Transcript-based displays