Transcript: PLOD2-002 OTTHUMT00000355185.1

Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2

Location

Chromosome 3: 146,069,444-146,161,167 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159417 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PLOD2-001	OTTHUMT00000355184.1	3732	758aa	OTTHUMP00000215204	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3132	-
PLOD2-002	OTTHUMT00000355185.1	3665	737aa	OTTHUMP00000215205	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3131	O00469
PLOD2-005	OTTHUMT00000355188.1	3043	418aa	OTTHUMP00000215207	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PLOD2-003	OTTHUMT00000355186.1	2908	703aa	OTTHUMP00000215206	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7ETU9
PLOD2-006	OTTHUMT00000355189.2	723	229aa	OTTHUMP00000215208	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PLOD2-007	OTTHUMT00000355190.1	550	98aa	OTTHUMP00000215209	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PLOD2-004	OTTHUMT00000355187.1	3835	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PLOD2-010	OTTHUMT00000355193.1	761	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PLOD2-008	OTTHUMT00000355191.1	530	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PLOD2-009	OTTHUMT00000355192.1	480	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 3,665 bps Translation length: 737 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3131

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 02/06/2009)

Alternative symbols

RP11-274H2.1-002

Other assemblies

This transcript maps to 146,069,444-146,161,167 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000360060

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: PLOD2-002 OTTHUMT00000355185.1

Summary

Transcript-based displays