Transcript: COL6A6-002 OTTHUMT00000357022.1

Description

collagen type VI alpha 6

Location

About this transcript

This transcript has 28 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL6A6-001	OTTHUMT00000356705.5	9581	2263aa	OTTHUMP00000216111	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46911	A6NMZ7
COL6A6-003	OTTHUMT00000357023.2	778	259aa	OTTHUMP00000216297	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COL6A6-002	OTTHUMT00000357022.1	4353	298aa	OTTHUMP00000216296	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 28 Transcript length: 4,353 bps Translation length: 298 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 24/06/2009)

Alternative symbols

RP11-229C17.2-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 130,581,682-130,677,044 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000506143

Curation Method

Manual annotation from Havana