Transcript: CENPE-005 OTTHUMT00000363298.1

Description

centromere protein E, 312kDa

Location

Chromosome 4: 103,116,364-103,120,336 reverse strand.

About this transcript

This transcript has 2 exons.

Gene

This transcript is a product of gene OTTHUMG00000160980 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CENPE-001	OTTHUMT00000363246.2	8241	2580aa	OTTHUMP00000219480	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS68768	-
CENPE-007	OTTHUMT00000368899.2	3468	1126aa	OTTHUMP00000222021	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6RBW0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CENPE-006	OTTHUMT00000364400.2	581	183aa	OTTHUMP00000219972	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6RHK2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CENPE-002	OTTHUMT00000363247.3	8504	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CENPE-003	OTTHUMT00000363296.1	792	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CENPE-005	OTTHUMT00000363298.1	515	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CENPE-004	OTTHUMT00000363297.1	291	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 515 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 15/09/2009)

Alternative symbols

RP11-291N5.1-005

Other assemblies

This transcript maps to 103,116,364-103,120,336 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000509823

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CENPE-005 OTTHUMT00000363298.1

Summary

Transcript-based displays