Transcript: OTULIN-004 OTTHUMT00000366015.1

Description

OTU deubiquitinase with linear linkage specificity

Location

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
OTULIN-001	OTTHUMT00000366012.1	7800	352aa	OTTHUMP00000220699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43302	Q96BN8
OTULIN-005	OTTHUMT00000366016.1	605	84aa	OTTHUMP00000220702	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
OTULIN-003	OTTHUMT00000366014.1	911	58aa	OTTHUMP00000220700	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RD57
OTULIN-004	OTTHUMT00000366015.1	420	66aa	OTTHUMP00000220701	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
OTULIN-002	OTTHUMT00000366013.1	742	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
OTULIN-006	OTTHUMT00000366017.1	469	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 420 bps Translation length: 66 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 05/10/2009)

Alternative symbols

CTD-2335I23.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 14,678,756-14,690,151 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000514913

Curation Method

Manual annotation from Havana