Description
ntegrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
Location
Chromosome 17: 50,076,625-50,090,481 forward strand.
About this transcript
This transcript has 7 exons and is annotated with 6 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000161890 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ITGA3-001 | OTTHUMT00000366298.1 | 4888 | 1051aa | OTTHUMP00000220803 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11558 | A0A140VJM0 | |
| ITGA3-020 | OTTHUMT00000440087.1 | 3665 | 1066aa | OTTHUMP00000258263 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | P26006 | |
| ITGA3-014 | OTTHUMT00000366485.2 | 827 | 221aa | OTTHUMP00000220886 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ITGA3-010 | OTTHUMT00000366481.3 | 351 | 117aa | OTTHUMP00000265244 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EMU3 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ITGA3-004 | OTTHUMT00000366301.2 | 3446 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ITGA3-005 | OTTHUMT00000366302.1 | 1283 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ITGA3-003 | OTTHUMT00000366300.2 | 1817 | 142aa | OTTHUMP00000220805 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ITGA3-012 | OTTHUMT00000366483.2 | 518 | 84aa | OTTHUMP00000220885 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YA32 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ITGA3-018 | OTTHUMT00000366489.2 | 227 | 29aa | OTTHUMP00000265245 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ITGA3-002 | OTTHUMT00000366299.1 | 5479 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-006 | OTTHUMT00000366303.1 | 3055 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-019 | OTTHUMT00000440088.1 | 2495 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-017 | OTTHUMT00000366488.1 | 860 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-011 | OTTHUMT00000366482.1 | 600 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-013 | OTTHUMT00000366484.1 | 576 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-009 | OTTHUMT00000366480.1 | 549 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-016 | OTTHUMT00000366487.1 | 535 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA3-015 | OTTHUMT00000366486.1 | 399 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
