Transcript: SLCO6A1-004 OTTHUMT00000370338.1

Description

solute carrier organic anion transporter family, member 6A1

Location

Chromosome 5: 102,371,946-102,498,913 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 19 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000162759 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLCO6A1-001	OTTHUMT00000370335.1	2689	719aa	OTTHUMP00000222643	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34206	A0A140VJU7
SLCO6A1-002	OTTHUMT00000370336.1	2437	719aa	OTTHUMP00000222644	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34206	A0A140VJU7
SLCO6A1-003	OTTHUMT00000370337.1	2340	657aa	OTTHUMP00000222645	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75282	-
SLCO6A1-004	OTTHUMT00000370338.1	1611	466aa	OTTHUMP00000222646	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS78042	C9J020
SLCO6A1-005	OTTHUMT00000370339.1	432	25aa	OTTHUMP00000222647	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SLCO6A1-007	OTTHUMT00000370341.1	827	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO6A1-008	OTTHUMT00000370342.1	669	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO6A1-006	OTTHUMT00000370340.2	672	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SLCO6A1-009	OTTHUMT00000370343.1	450	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,611 bps Translation length: 466 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS78042

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/11/2009)

Alternative symbols

RP11-569B5.1-004

Other assemblies

This transcript maps to 102,371,946-102,498,913 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000513675

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLCO6A1-004 OTTHUMT00000370338.1

Summary

Transcript-based displays