Description
sideroflexin 1
Location
Chromosome 5: 175,478,575-175,511,579 forward strand.
About this transcript
This transcript has 5 exons and is annotated with 4 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000130555 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SFXN1-001 | OTTHUMT00000252980.2 | 4231 | 322aa | OTTHUMP00000161114 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4394 | Q9H9B4 | |
| SFXN1-004 | OTTHUMT00000371836.2 | 796 | 193aa | OTTHUMP00000223227 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RFI0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SFXN1-010 | OTTHUMT00000371842.2 | 637 | 177aa | OTTHUMP00000272607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | S4R2X2 | |
| SFXN1-012 | OTTHUMT00000371914.2 | 572 | 144aa | OTTHUMP00000223254 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RDG7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SFXN1-003 | OTTHUMT00000371835.1 | 1790 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SFXN1-002 | OTTHUMT00000371834.1 | 2611 | 56aa | OTTHUMP00000223226 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RAE9 | |
| SFXN1-007 | OTTHUMT00000371839.1 | 641 | 22aa | OTTHUMP00000223228 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SFXN1-005 | OTTHUMT00000371837.1 | 569 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFXN1-009 | OTTHUMT00000371841.1 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFXN1-008 | OTTHUMT00000371840.1 | 592 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFXN1-011 | OTTHUMT00000371843.1 | 551 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFXN1-006 | OTTHUMT00000371838.1 | 527 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFXN1-014 | OTTHUMT00000371915.2 | 453 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
